Sorry for the lack of response. I accomplished my task, probably was the strangest way but meh.
My C: drive had the System partition whilst my D: drive had my Boot partition. I wanted D: to have system so I could properly boot into windows, so I assigned my C: to another letter, popped in my Windows 7 disk, and repaired the start up. I was able to boot into Windows 7 with my D: drive as the active drive, and afterwards I deleted my C: volume and created a new volume for storage space.